Plant GARDEN
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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015911588.1_cds_XP_016461588.1_54891
CDS Infomation

[gene=LOC107784906] [db_xref=GeneID:107784906] [protein=indole-3-acetic acid-amido synthetase GH3.6-like] [protein_id=XP_016461588.1] [location=complement(join(71987..72573,72682..73604,73776..74095))] [gbkey=CDS]
Sequence

ATGGAAAGAAGCGTAGCTAATGAGGCACCAAAGGCCACAATAATGGTGGAGGACTACAAG
AAGAATCTTGAGTTCATTGAAGAGGTGACTAGCAATGTTGATGAGGTCCAAATGAGAGTT
CTTGCTGAAATCCTCTCCCAGAATGCACATGTTGAGTACTTGCAACGCTATAATCTCAAT
GGCCGCACTGATAGAGAGACATTCAAGAAAGTCGTACCTGTCATCACTTATGAAGATATT
CAGCCTGATATCAAACGTATAGCCTATGGTGATAAATCTCCTATTCTCTGCTCCCAACCC
ATCTCTGAATTATTGTCAAGTTCTGGCACGTCTGGAGGGGAGAGCAAATTGATACCATCA
ACAGAGGCAGCGCTTGGGAGGAGATTACAGCTTCTAAAACTTCTGATGTCTGTGATGAGC
CAAGTGGCTCCAGATTTTGGAAAGGGTAAAGGAATGTATTTCATGTTCATAAGTTCTGAA
CAGAAGACCCCAGGAGGATTACTAGCACGCTTTTTTACAACTAGTTTTTACAAGAGTCCT
TATATCAACTGCGGATACCCCTGCAGGAAATTCACTAGTCCAACGGCAACCATTCTTTGC
CAAGACTCTTACCAAAGTATGTACTCGCAAATGCTCTGTGGCCTCTGCCAAAACCAAGAA
GTCCTCCGTGTTGGCTCGCTTTTTGCAACCGGCTTCATTCGTGGCATCCGTTTCTTGGAG
AAGCATTGGTCTCTACTTTGTAACGATATCCGAAACGGAACCATTAACACCCAAATTACA
GATCCTTCAGTGAGAGAAGCAGTGATGGAAATCCTCAAACCTGACCCAAAATTAGCTGAT
TTCATTGAGGCTGAATGCAGCAAAGACTCATGGCAAGGAATCATCACTAGGTTGTGGCCT
AATACCAAGTATGTGGATGCTATTTTGACTGGATCCATGTCACAATATATACCGATACTT
GATTATTACAGCAATAGCCTCCCTCTTATCAGTACTTTGTATGGTTCCTCAGAATGCCAC
TTTGGAATCAACTTGAACCCTTTTTGTAAGCCCAGTGAAGTCTCTTACACCCTTATTCCC
ACCATGTGCTATTTTGAGTTCTTACCATATCACGGAAATAGTGGAGTCATTGATTCTATC
TCCATGCCTAAGTCGCTTAATGAGAAAGAACAACAACAATTGGTTGATTTGGCTGATGTC
GAGATTGGCCAGGAGTACGAGCTTGTTGTTACCACATATTCTGGACTCTACAGATATAGA
GTCGGTGATGTGCTTCGGGTTGCTGGATACAAGAACAACGCGCCTCGATTCAACTTCCTA
TGCCGGGAAAATGTAATCTTGAGCATTGGTGCTGACTTCACTAATGAAGTTGAGCTACAA
AACGCAGTGAAAAATGCAGTGGGCAATCTGATGCCATTTGATTCTCAGGTAACCGAGTAC
ACCGGCTATGTCGATATTACCACCATTCCAAGCCACTATGTCATATTCTGGGAGCTGAAT
GCGAATGACTCTACCCCAGTTCCTCCTTCAGTCTTTGAAGATTGCTGCCTCACAATTGAA
GAATCTCTTAACTACTTCTACCGCGAGGGCCGTGCGTCTAATGCATCCATCGGGCCTCTA
GAAATTAGGGTGGTGGAAATTGGAACTTTTGACAAGCTCATGGACTACTGCAGTAGCTTA
GGTGCTTCCATGAACCAATACAAGACACCCCGTTGTGTCAAATATGCACCCCTTATTGAG
CTATTGAACTCTAGGGTCGTCTCCAGATACTTCAGTCCCATGTGTCCAAAATGGGTTCCT
GGCTACAAGAAATGGAACAACACCAGTTAA

Peptide Sequence

PEP ID

XP_016461588.1
PEP Infomation

PREDICTED: indole-3-acetic acid-amido synthetase GH3.6-like [Nicotiana tabacum]
Sequence

MERSVANEAPKATIMVEDYKKNLEFIEEVTSNVDEVQMRVLAEILSQNAHVEYLQRYNLN
GRTDRETFKKVVPVITYEDIQPDIKRIAYGDKSPILCSQPISELLSSSGTSGGESKLIPS
TEAALGRRLQLLKLLMSVMSQVAPDFGKGKGMYFMFISSEQKTPGGLLARFFTTSFYKSP
YINCGYPCRKFTSPTATILCQDSYQSMYSQMLCGLCQNQEVLRVGSLFATGFIRGIRFLE
KHWSLLCNDIRNGTINTQITDPSVREAVMEILKPDPKLADFIEAECSKDSWQGIITRLWP
NTKYVDAILTGSMSQYIPILDYYSNSLPLISTLYGSSECHFGINLNPFCKPSEVSYTLIP
TMCYFEFLPYHGNSGVIDSISMPKSLNEKEQQQLVDLADVEIGQEYELVVTTYSGLYRYR
VGDVLRVAGYKNNAPRFNFLCRENVILSIGADFTNEVELQNAVKNAVGNLMPFDSQVTEY
TGYVDITTIPSHYVIFWELNANDSTPVPPSVFEDCCLTIEESLNYFYREGRASNASIGPL
EIRVVEIGTFDKLMDYCSSLGASMNQYKTPRCVKYAPLIELLNSRVVSRYFSPMCPKWVP
GYKKWNNTS

Transcript Sequence

Gene sequence data has not been registered.